PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK37275.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 345aa    MW: 38489.7 Da    PI: 9.082
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK37275.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix673.8e-2155145186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                 +W+ +e+ aLi+a+re++ +l+rg+lk+++Weev++ +        ++++++qC++k+e+l+kry+ + +++++   ++  s++++f+++e
  KFK37275.1  55 CWSLEETIALIDAYREKWLALNRGNLKANHWEEVAESVsancPNVTLKKTAVQCRHKMEKLRKRYRTEIQRARSVpVARFMSSWVHFKRME 145
                 7********************************9999977779999****************************9779999*********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.008552118IPR001005SANT/Myb domain
PfamPF138371.6E-2054147No hitNo description
PROSITE profilePS500906.2656116IPR017877Myb-like domain
SMARTSM005953.1E-1063152IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MSDPDSPMNH DPIPDPIPDP DPNQIQPPPP ASVTDLTIAS IPPPSKASRR LPPPCWSLEE  60
TIALIDAYRE KWLALNRGNL KANHWEEVAE SVSANCPNVT LKKTAVQCRH KMEKLRKRYR  120
TEIQRARSVP VARFMSSWVH FKRMESMEIR VETKLSKYSE EEEEEEDGNY AARFRGGGSV  180
AARTTTPRFF NRNGSVGSGS SSGGIRIRIP TGVSIAQPGP RFPGKIDQKY TANSSSIPAR  240
VSNFGGGKRG REMEEEEAEE DDPMVAIASA IKLLGDTLVR TENTKMEMTK EIEAMRMDME  300
MKRTKMILES QQRIVEAFAK SLSENAEKKK ARRVSSLATS LATDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006397652.11e-163hypothetical protein EUTSA_v10001488mg
TrEMBLA0A087H5730.0A0A087H573_ARAAL; Uncharacterized protein
STRINGAT2G44730.11e-156(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM89632534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-150Trihelix family protein